| Boys' Singles | |
|---|---|
| 1999 Wimbledon Championships | |
| Champion |
|
| Runner-up |
|
| Final score | 7–6(9–7), 6–3 |
Roger Federer was the defending champion, but did not complete in the Juniors this year.
Austrian Jürgen Melzer defeated Danish first seed Kristian Pless in the final, 7–6(9–7), 6–3.