Negeri Sembilan played in the Malaysian Super League and the Malaysian FA Cup. Negeri Sembilan qualified for the Malaysia Cup, after finishing 7th in the Super League, Negeri qualified to Malaysia Cup Final for the first time with their coach Wan Jamak Wan Hassan. They won the trophy after defeating Kelantan FA. Midfielder Shahurain Abu Samah capitalised on a defensive mix-up in the Kelantan box to open the scoring in the 18th minute before on-loan Malaysian international striker Hairuddin Omar doubled the lead a minute into the second half. Mohd Zaquan Adha Abdul Radzak put the result beyond doubt when he converted a penalty in the 58th minute after Shahurain Abu Samah was brought down. Kelantan, who were chasing their first Malaysia Cup title after finishing runner-up, scored a consolation goal in stoppage time through a free-kick from striker Indra Putra Mahayuddin, the competition's leading scorer. Negeri ended their FA campaign at Semi-Final, defeated by Kelantan FA.

3 new faces in squad of the 2010 season are Kaharuddin Rahman, Fiqri Azwan Ghazali and Mohd Norizam Salaman. While the 6 pillars of migratory jangs choose not to renew the contract are Muhd Arif Ismail, K. Ravindran, Mohd Affify Khusli, Muhamad Asyriff Afiq Shahrulzaman, I. Arulchelvan and Mohd Faiz Isa.

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