| Boys' Doubles | |
|---|---|
| 2016 US Open | |
| Champions |
|
| Runners-up |
|
| Final score | 6–3, 7–6(7–4) |
Félix Auger-Aliassime and Denis Shapovalov were the defending champions, however Shapovalov withdrew due to injury. Auger-Aliassime played alongside Benjamin Sigouin, but lost in the final to Juan Carlos Aguilar and Felipe Meligeni Alves, 3–6, 6–7(4–7).